SubtiBank SubtiBank
yvdE [2019-02-08 17:23:59]
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yvdE [2019-02-08 17:23:59]

similar to transcriptional regulator (LacI family), probably regulator of starch and maltodextrin utilization
Locus
BSU34630
Isoelectric point
7.09
Molecular weight
35.28 kDa
Protein length
316 aa Sequence Blast
Gene length
951 bp Sequence Blast
Function
probably regulation of starch and maltodextrin utilization
Product
transcriptional regulator (LacI family)
Essential
no
Synonyms
mdxR
Outlinks
KEGGBsubCycSubtiListUniProtExpression Browser

Genomic Context

      
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Categories containing this gene/protein

  • Metabolism → Carbon metabolism → Utilization of specific carbon sources → Utilization of starch/ maltodextrin
  • Information processing → Regulation of gene expression → Transcription factors and their control → Transcription factor/ other/ based on similarity

    • Gene

    Coordinates
    3,557,784 → 3,558,734

    The protein

    Protein family

  • LacI family

    • Structure

  • 5YSZ (30% identity)

    • Expression and Regulation

    Operons

    Genes
    yvdE-yvdF-mdxE-mdxF-mdxG-yvdJ-yvdK-malL-pgcM
    Description
    PubMed

    Regulation

  • induced in the presence of maltose PubMed
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    Biological materials

    Mutant

  • BKE34630 (ΔyvdE::erm trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTTCATCCCCTCCTTAT, downstream forward: _UP4_TAAGCGCCTTATTCTGTTAT
  • BKK34630 (ΔyvdE::kan trpC2) available at BGSC, PubMed, upstream reverse: _UP1_CATTTTCATCCCCTCCTTAT, downstream forward: _UP4_TAAGCGCCTTATTCTGTTAT

    • References

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